Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSVIKKRRKRMSKKKHRKLLRRTRVQRRKLGK
1EJ5 Chain:A ((87-97))
--HVMQKRSRAIH--------------------
General information:
TITO was launched using:
RESULT:
Template:
1EJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 876 for 31 contacts (28.3/contact) +
2D Compatibility (PS) -1005 + (NN) 1292 + (LL) 1784
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 1597.0 ( 51.52 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_1EJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJ5-query.scw
PDB file :
Tito_Scwrl_1EJ5.pdb
: