Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIGTRGSLLATTQAATVRDALIAG--GHSAELVTISTEGDRSMAPIASLG-VGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH |
| 1YPN Chain:A ((5-303)) | VLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDV---------GQGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELI-----DGEIW----LRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129934 for 2415 contacts (-53.8/contact) +
2D Compatibility (PS) -31699 + (NN) -21783 + (LL) 1492
1D Compatibility (HY) -20800 + (ID) 6500
Total energy: -209224.0 ( -86.64 by residue)
QMean score : 0.459
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