Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRFLTSIVAWLRAGYPEGIPPTDSFAVLALLCRRLSHDEVKAVANELMRLGDFDQI----DIGVVITHFTDELPSPEDVERVRARLAAQGWPLDDVRDREEHA
3OL4 Chain:A ((8-98))
---FMDNVLGWLHKGYPEGVPPKDYFALLALLKRSLTEDEVVRAAQAILRSTDGQSPVTDDDIRNAVHQIIEKEPTAEEINQVAARLASVGWPL----------
General information:
TITO was launched using:
RESULT:
Template:
3OL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31301 for 528 contacts (-59.3/contact) +
2D Compatibility (PS) -9735 + (NN) -11631 + (LL) 788
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -60579.0 ( -114.73 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_3OL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OL4-query.scw
PDB file :
Tito_Scwrl_3OL4.pdb
: