Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRFAAGAGRHGAPAPRAEQGDTL
4QFE Chain:A ((6-234))
VSEPVRIERNGPVTTVIIDRPEARNAVNGPTAAALFAAFEEFDADDTASVAVLTGANGTFCAGADLKAFGTPEANQVHREGPGPMGPSRMDLSKPVIAAISGYAVAGGLELALWCDLRVVDEDATMGVF------PLIDGGTVRLPRLIGHSRAMDLILTGRAVDAAEAYAIGLANRVVPTGQARQAAEELAADLARLPQQCMRADRLSALHQWGESENAAMDFEFASI----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129059 for 1884 contacts (-68.5/contact) +
2D Compatibility (PS) -25057 + (NN) -15386 + (LL) 2188
1D Compatibility (HY) -24400 + (ID) 9150
Total energy: -200864.0 ( -106.62 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4QFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QFE-query.scw
PDB file :
Tito_Scwrl_4QFE.pdb
: