Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPD-TTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGT-ADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 4YCO Chain:A ((9-237)) | -----------------------VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAV--ELGSWGVDLNCGAPS----GSGGGATLLKDPELIYQ-GAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA-GATELVVHGRTKEQGYRAEHIDWQAIGDIRQRL-NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125631 for 1942 contacts (-64.7/contact) +
2D Compatibility (PS) -24567 + (NN) -11102 + (LL) 7956
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -171294.0 ( -88.20 by residue)
QMean score : 0.385
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