Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPEPPHHENAELAAMNLEMLESQPVPEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPDGKDLAILLLRLGRGRLGH
2W1A Chain:C ((13-90))
---------------------------EIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPDGKDLAILLLRLGRGRLGH
General information:
TITO was launched using:
RESULT:
Template:
2W1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3199 for 392 contacts (-8.2/contact) +
2D Compatibility (PS) -9109 + (NN) -8002 + (LL) 1716
1D Compatibility (HY) -10000 + (ID) 3900
Total energy: -32494.0 ( -82.89 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2W1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W1A-query.scw
PDB file :
Tito_Scwrl_2W1A.pdb
: