Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQ--AAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
4UIG Chain:A ((50-130))
-------QKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHLRHCVADAALKGGTEIDAKVEEATKAI---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20909 for 401 contacts (-52.1/contact) +
2D Compatibility (PS) -8688 + (NN) -6261 + (LL) 1892
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -41716.0 ( -104.03 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4UIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UIG-query.scw
PDB file :
Tito_Scwrl_4UIG.pdb
: