Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
4Y7K Chain:A ((7-46))
----FKEFLYEYKVIPLAIAFIMGIASTALIKSFVDNIIMPIIT-----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Y7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12976 for 169 contacts (-76.8/contact) +
2D Compatibility (PS) -4244 + (NN) -2544 + (LL) 5620
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -21494.0 ( -127.18 by residue)
QMean score : 0.105
(partial model without unconserved sides chains):
PDB file :
Tito_4Y7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Y7K-query.scw
PDB file :
Tito_Scwrl_4Y7K.pdb
: