Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
3Q0G Chain:A ((2-256))
-TYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKE---LTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTH-
General information:
TITO was launched using:
RESULT:
Template:
3Q0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119834 for 2031 contacts (-59.0/contact) +
2D Compatibility (PS) -27272 + (NN) -9745 + (LL) 584
1D Compatibility (HY) -30000 + (ID) 12600
Total energy: -198867.0 ( -97.92 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0G-query.scw
PDB file :
Tito_Scwrl_3Q0G.pdb
: