Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVTGAAGIGLATLAADGSVLDTWFPAPELTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGPVTVYGVDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTRVTMPDSNSVKARELSGSSNLLFRRNSVSGAVEVLARDGQGIALNEDLHAN |
| 5E3Q Chain:A ((1-286)) | ----TTASATGIATLTSTGDVLDVWYP-----EIGSTDQSALT----PLE-----GVDEDRNVTRKIVTTTI-DIDAAPTDTYDAWLRLHLLSHRVFRPHTINLDGIFGLLNNVVWTNFGPCAVDGFALTRARLSRRGQVTVYSVDKFPRMVDYVVPSGVRIGDADRVRLGAYLADGTTVMHEGFVNFNAGTLGASMVEGRISAGVTVDDGTDVGGGASIMG--------VISLGKRCLLGANSGCGIPLGDDCIIEAGLYITAGTKV-LFDGSLHKASTLAGSNGLIFRRDSVSGQV-VAVPNTKV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5E3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188611 for 2329 contacts (-81.0/contact) +
2D Compatibility (PS) -30911 + (NN) -19031 + (LL) 2404
1D Compatibility (HY) -30400 + (ID) 9350
Total energy: -275899.0 ( -118.46 by residue)
QMean score : 0.488
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