Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKSVSASGD---TLGAVISDLEANYSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
2M19 Chain:A ((16-92))
----------------GQKSIYWRVDDDATVGDVLRSLEAEYDGLAGRLIED---GEVKPHVNVLKNGREVVHLDGMATALDDGDAVSVFPPVAGG
General information:
TITO was launched using:
RESULT:
Template:
2M19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43307 for 444 contacts (-97.5/contact) +
2D Compatibility (PS) -8026 + (NN) -3666 + (LL) 720
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -62729.0 ( -141.28 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_2M19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M19-query.scw
PDB file :
Tito_Scwrl_2M19.pdb
: