Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS
4ZRA Chain:A ((8-203))
-----------------------------------GPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVT-----
General information:
TITO was launched using:
RESULT:
Template:
4ZRA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91980 for 1547 contacts (-59.5/contact) +
2D Compatibility (PS) -21539 + (NN) -14608 + (LL) 2260
1D Compatibility (HY) -21600 + (ID) 9800
Total energy: -157267.0 ( -101.66 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_4ZRA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZRA-query.scw
PDB file :
Tito_Scwrl_4ZRA.pdb
: