Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGA------TLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGG-ADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLGFTSGGV-RLTRTKTRPYLGDLGAAVA-------------PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
| 2WT4 Chain:A ((5-329)) | --------LPTIA---LLATGGTIAGS-G------------GVKELLKAIPSLNKIARIQGEQVSNIGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLHSTKPVVLVGAMRNASSLSADGALNLYEAVSVAVNEKSANKGVLVVMDDTIFSVREVVKTHTTHVSTFK----ALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQMG---VVIVRSSRVGSGGVTSG---EIDDKAYGFITSDNLNPQKARVLLQLALTKTNDKAKIQEMF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219356 for 2457 contacts (-89.3/contact) +
2D Compatibility (PS) -32663 + (NN) -20280 + (LL) 336
1D Compatibility (HY) -17200 + (ID) 4700
Total energy: -293863.0 ( -119.60 by residue)
QMean score : 0.535
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