Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGPAWRDAADVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQTHVTATHYAQGGIAVVLPDNDDSVDAHVADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTREGGHSRRRIVHAGGDATGAEVQRALQDAA---GMLDIRTGHVALRVLHDGTAVTGLLVVRPDGCGIIS-APSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGRAGGRRPLITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLKATGDPCVYLDARGIEGFASRFPTVTASCRAAGIDPVRQPIPVVPGAHYSCGGIVTDVYGQTELLGLYAAGEVARTGLHGANRLASNSLLEGLVVG-------GRAGKAAAAHAAAAGRSRATSSATWPEPISYTALDRGDLQRAMSRDASMYRAAAGLHRLCDSLSGAQVRDVACRRDFEDVALTLVAQSVTAAALARTESRGCHHRAEYPCTVPEQARSIVVRGADDANAVCVQALVAVC |
2E5V Chain:A ((2-469)) | -----------IYIIGSGIAGLSAGVALRRAGKKVTLISKRIDG--GSTPIAKGGVAASVG-SDDSPELHAQDTIRVGDGLCDVKTVNYVTSEAKNVIETFESWGFEFEED------LRLEGGHTKRRVLHRT-DETGREIFNFLLKLAREEGIPIIEDRLVEIRV-KDG-KVTGFVT---EKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVT---SLDGEVFLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAI--YIEMLKGHKVFIDLSKIEDFERKFPVVAKYLARHGHN-YKVKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSSWEGISTDDGIVHSVRISGNKT---------LSLKEIRRINWENVGIIRNEEKLVKAINTYSSSTQNE------------AIISYLTALAAEIRKESRGNHFREDYPYKDPNWEKRIYFK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291280 for 4213 contacts (-69.1/contact) +
2D Compatibility (PS) -49002 + (NN) -20251 + (LL) 4380
1D Compatibility (HY) -30000 + (ID) 8000
Total energy: -394153.0 ( -93.56 by residue)
QMean score : 0.491
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