Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARVKRAVNAHKKRRSILKASRGYRGQRSRLYRKAKEQQLHSLNYAYRDRRARKGEFRKLWIARINAAARLNDITYNRLIQGLKAAGVEVDRKNLADIAISDPAAFTALVDVARAALPEDVNAPSGEAA
4WF9 Chain:N ((2-117))
-PRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKLWITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDAL------------
General information:
TITO was launched using:
RESULT:
Template:
4WF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25815 for 689 contacts (-37.5/contact) +
2D Compatibility (PS) -12735 + (NN) -6083 + (LL) 404
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: -55929.0 ( -81.17 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_4WF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WF9-query.scw
PDB file :
Tito_Scwrl_4WF9.pdb
: