Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
5CO8 Chain:A ((203-289))
----------------------------------------------------GIPGCGIKVACQAAKAGFGKELC--------AITEWKQRLLH
General information:
TITO was launched using:
RESULT:
Template:
5CO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 142 for 138 contacts (1.0/contact) +
2D Compatibility (PS) -3630 + (NN) -1058 + (LL) 4216
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -4030.0 ( -29.20 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_5CO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CO8-query.scw
PDB file :
Tito_Scwrl_5CO8.pdb
: