Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPM------EEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
| 5DLB Chain:A ((142-301)) | -------------------------------------------------------------------------------------------------------------------------------VVALRNAQLVTFTAMDIDDPRALVPVLGVGLSA---RPPARFEEFSMPMRVGARADERLRSGESLDEV---------LDYLGIPVSARPVVQAVFSGPRSYVEIVAGCNRDGEHTTTDVGLSIVDTTAGRV-LVSPSR-AFDGEWVSTFSAGTPFATAVAIDQLIANLPDGQWF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DLB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61240 for 1032 contacts (-59.3/contact) +
2D Compatibility (PS) -16483 + (NN) -4548 + (LL) 9408
1D Compatibility (HY) -10400 + (ID) 1950
Total energy: -85213.0 ( -82.57 by residue)
QMean score : 0.449
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