Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADLDLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGIMPVGRIVDEPDPVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGEIYAVGVATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGT---------GGIKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE
4NBU Chain:A ((10-238))-------------RLQDKVAIITGAANGIGLEAARVFMKEGAKVVIADFNEAAGKEAVEANPGVVFIRVDVSDRESVHRLVENVAERFGKIDILINNAGITRDSMLSKMTVDQFQQVINVNLTGVFHCTQAVLPYMAEQGKGKIINTSSVTGTYGNVGQTNYAAAKAGVIGMTKTWAKELARKGINVNAVAPGFTETAMVAEVPEKVIEKMKAQVPMGRLGKPEDIANAYLFLASHESDYVN-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129177 for 1912 contacts (-67.6/contact) +
2D Compatibility (PS) -22957 + (NN) -3465 + (LL) 4456
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -166193.0 ( -86.92 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_4NBU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NBU-query.scw
PDB file : Tito_Scwrl_4NBU.pdb: