Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTCEMRESALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYEGRQVRYALADSHLARALGELVQVVLAVDTDQPCVAERAASGEAVEMTGS
1R1V Chain:A ((16-96))
----------VTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIH---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R1V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84562 for 548 contacts (-154.3/contact) +
2D Compatibility (PS) -8703 + (NN) -3506 + (LL) 3188
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -100883.0 ( -184.09 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_1R1V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1V-query.scw
PDB file :
Tito_Scwrl_1R1V.pdb
: