Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP
1BQX Chain:A ((2-77))
--YVITEPCIGTKCASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50844 for 542 contacts (-93.8/contact) +
2D Compatibility (PS) -7649 + (NN) -2784 + (LL) 1408
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -70019.0 ( -129.19 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1BQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BQX-query.scw
PDB file :
Tito_Scwrl_1BQX.pdb
: