Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSATGPFSIGERVQLTDAKGRRYTMSLTPGAEFHTHRGSIAHDAVIGLEQGSVVKSSNGALFLVLRPLLVDYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRA-KQCWTEPRAWETLQRGWNVVGLAVRPQHSMRGHTAFLVATRRLAPGAVAPAPLGRKREGRDG
3MB5 Chain:A ((5-253))---------GDKVVLVDPRGKRYLITVSK-RDFHTDLGILKLEEIIGRNFGEAIKSHKGHEFKILRPRIVDYLDKMKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK--WAGFDDRVTIKLKDIYEG-IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVLVFDQEVKKECMRPRTTALVHTGYITFARRI-------------------


General information:
TITO was launched using:
RESULT:

Template: 3MB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152070 for 1972 contacts (-77.1/contact) +
2D Compatibility (PS) -27345 + (NN) -16161 + (LL) 416
1D Compatibility (HY) -15200 + (ID) 4550
Total energy: -214910.0 ( -108.98 by residue)
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_3MB5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MB5-query.scw
PDB file : Tito_Scwrl_3MB5.pdb: