Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSHCSHTFITDNRSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDDRAPSRGYARPRFDDDYGRYDGRDYDDARSDSRG-DLRGEPADYPPPGYRGGYADEPRFRPREFDRAEMTR--PRFGSWLRNSTRGALAMDPRRMAMMFEDGHPLSK--ITTLRPKDYSEARTIGERFRDGSPVIMDLVSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRIAETGFYAYQ |
| 1VJS Chain:A ((144-272)) | ---------------------------------------------------PGRGSTYSDFKWHWYHFDGTDWDESRKLNRIYKFQGKA-----------Y-DYLMYADIDYDHPDVAAEIKRWGTWYANE----LQLDGFRLDAVKHIKFSFLRDWVNHVREKTGKEMFTVAEYWQN------DLGALEN------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29606 for 580 contacts (51.0/contact) +
2D Compatibility (PS) -11467 + (NN) -3595 + (LL) 6872
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: 12766.0 ( 22.01 by residue)
QMean score : 0.088
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