Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGSIRSKLSAIDVRQLGTVDYRTAWQLQRELADARVAGG-ADTLLLLEHPAVYTAGRRT--------ETHERPIDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAEPLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSAELGRTVTVDEVRATVAAAVCAALDGVLPVGDRVPSHAVPSPL
2QHV Chain:A ((5-210))
-------------VEDLGLVPYGEAWAYQKRVHREVVAGNRPPTLLLLEHPRVITLGRKATGENLLFPESWYRE-NGFELYWVERGGDVTYHGPGQLVGYPIFPVGR--EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVG---EDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLLGRKVPMEEAKARVVAAF-AEVFGLRPV-------------
General information:
TITO was launched using:
RESULT:
Template:
2QHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101478 for 1586 contacts (-64.0/contact) +
2D Compatibility (PS) -21506 + (NN) -10621 + (LL) 1028
1D Compatibility (HY) -21600 + (ID) 4550
Total energy: -158727.0 ( -100.08 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_2QHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QHV-query.scw
PDB file :
Tito_Scwrl_2QHV.pdb
: