Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGDRDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEIDQARHQHSSQRDMLTATLDPELAGLYERQRAGGGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLRLEGFEE
4RH7 Chain:A ((2256-2373))
------------------------------------------------------------------------------------------------AGLESNLKKTEDRKRKLEELLNSVGQKVSELKEKFQSRTSEAAKLEAEVSKAQETIKAAEVLINQLDREH-KRWNAQVVEITEELATLPKRAQ--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8885 for 368 contacts (24.1/contact) +
2D Compatibility (PS) -11219 + (NN) -12206 + (LL) 11092
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -6598.0 ( -17.93 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_4RH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RH7-query.scw
PDB file :
Tito_Scwrl_4RH7.pdb
: