Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDAL-AATSKDAIDKVNAYVAAFNQGR----NTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF |
3MLU Chain:H ((57-157)) | --------------------------------------------------------------------------------------------------------------------DAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFD-------LWGQGTMILVSSGTTKGPSVFPLAPS------G-TAALGCLVKDYF--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8572 for 370 contacts (23.2/contact) +
2D Compatibility (PS) -8890 + (NN) 1795 + (LL) 11388
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: 5865.0 ( 15.85 by residue)
QMean score : 0.120
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