Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVR-RFLSTKVGPRQG---ATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE |
| 3OQH Chain:A ((13-233)) | ---------------------------------------------------------------FKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAANLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPED----IHTFSDFANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAIL---------VVEVSADMLELAVEYVIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102792 for 1698 contacts (-60.5/contact) +
2D Compatibility (PS) -22533 + (NN) -13680 + (LL) 2308
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -152047.0 ( -89.54 by residue)
QMean score : 0.396
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