Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTAMRGDIRAARERDPAAPTALEVIFCYPGVHAVWGHRLAHWLWQRGARLLARAAAEFTRILTGVDIHPGAVIGARVFIDHATGVVIGETAEVGDDVTIYHGVTLGGSGMVGGKRHPTVGDRVIIGAGAKVLGPIKIGEDSRIGANAVVVKPVPPSAVVVGVPGQVIGQS-QPSPGGPFDWRLPDLVGASLDSLLTRVARLEALGGGPQAAGVIRPPEAGIWHGEDFSI
4HZD Chain:A ((91-260))
----LRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129029 for 1395 contacts (-92.5/contact) +
2D Compatibility (PS) -18428 + (NN) -11338 + (LL) 2564
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -174131.0 ( -124.83 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_4HZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HZD-query.scw
PDB file :
Tito_Scwrl_4HZD.pdb
: