Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVPARPTPLFADIADVSRR---LAETGYLPDTATATAVFLADRLGKPLLVEGPAGVGKTELARAVAQATGSGLVRLQCYEGVDEARALYEWNHAKQILRIQAGSGDWEATKTDVFSEEFLLQRPLLTAIRRTEPTVLLIDETD-----------KADIEIEGLLLEVLSDFAVTVPELGTLTATRAPFVLLTSNATRELSEALKRRC-LYLHIDFPTPELERRILL----SRVPELPEHFA-EELVRIIGVLRGMQLKKVPSIAETIDWGRTVLALGLDTIDDAVVAATLGVVLKHQSDQQRATGELRLN |
| 5A5B Chain:M ((170-410)) | MEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKL----------------AAPQLVQMYIGEGAK-------------LVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLN-------QLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAV-----TVEAGMIALRNGQSSV----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102525 for 1618 contacts (-63.4/contact) +
2D Compatibility (PS) -23069 + (NN) -6103 + (LL) 5432
1D Compatibility (HY) -7200 + (ID) 3500
Total energy: -136965.0 ( -84.65 by residue)
QMean score : 0.197
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