Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT
4W4L Chain:B ((1-174))
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA--------------------
General information:
TITO was launched using:
RESULT:
Template:
4W4L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39966 for 1077 contacts (-37.1/contact) +
2D Compatibility (PS) -18869 + (NN) -7436 + (LL) 896
1D Compatibility (HY) -24800 + (ID) 8700
Total energy: -98875.0 ( -91.81 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_4W4L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W4L-query.scw
PDB file :
Tito_Scwrl_4W4L.pdb
: