Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKAPQKSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMSLAILNENRDDLPEQYREGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGLPAELAKAATSDAYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD
4NXI Chain:B ((9-206))
-------KSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMSLAILNENRDDLPEQYREGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGLPAELAKAATSDAYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQ--
General information:
TITO was launched using:
RESULT:
Template:
4NXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113169 for 1536 contacts (-73.7/contact) +
2D Compatibility (PS) -21386 + (NN) -10150 + (LL) 732
1D Compatibility (HY) -25200 + (ID) 9900
Total energy: -179073.0 ( -116.58 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4NXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NXI-query.scw
PDB file :
Tito_Scwrl_4NXI.pdb
: