Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAWLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVNSPF
4UZV Chain:A ((35-155))
---TFYEAVGGEETFTRLARRFFEGVAADPVLRPMFPEEDLGPAEERLRLFLMQYWGGPETYSERRGHPRLRMRHEPYRIGAEERDRFLTHMR---AAVDDLALPAHLEQQLWEYLVYAAYAMVNVP-
General information:
TITO was launched using:
RESULT:
Template:
4UZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60111 for 806 contacts (-74.6/contact) +
2D Compatibility (PS) -13352 + (NN) -9880 + (LL) 652
1D Compatibility (HY) -12800 + (ID) 3350
Total energy: -98841.0 ( -122.63 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4UZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UZV-query.scw
PDB file :
Tito_Scwrl_4UZV.pdb
: