Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE |
| 3A8G Chain:A ((117-137)) | --------------------------------------------------------------------------------------------------------------CTAWPILGL--------PPTWYKSFEYRARV---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1790 for 85 contacts (-21.1/contact) +
2D Compatibility (PS) -1956 + (NN) 788 + (LL) 17448
1D Compatibility (HY) 1200 + (ID) 100
Total energy: 15590.0 ( 183.41 by residue)
QMean score : 0.013
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