Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFAKGHGTQNDFVL-------LPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPVTCHHVEAAYADVSVDMG-------KANRLGAGEA-------VVGGRRFHGLAVDVGNPHLACVDSQLTVDGL--AALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSPTGT-LTVHVPGGEVVVTVTDATSFL-RGPSVLVARGDLADDWWNAMG |
2OTN Chain:A ((6-280)) | --FTKMHGLGNSYIYVNMFEEQIPEED--LALVAEKVSNI---NTGIGADGMILICPS---------DVAPVKMRMF-------NNDGSEGKSCGNGLRCVAKYAYEHKLVEDTVFTIETLAGIVTAEVTVEEGKVTLAKIDMGAPRLTRAEIPMLGEGETPFIRENFLYNNHRYAFTAVSMGNPH-----AVIFVDDVEQAPLTTLGPVLETHEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWTEEGNVLMKGPAEVICRG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128055 for 2053 contacts (-62.4/contact) +
2D Compatibility (PS) -27298 + (NN) -8442 + (LL) 3000
1D Compatibility (HY) -17600 + (ID) 4450
Total energy: -182845.0 ( -89.06 by residue)
QMean score : 0.376
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