Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESLRSLPGCHLLVRPEVMRR-------DVDLVVTVDIPSVDRLGALGDLT--DSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILDAWG--KPIDPRVAHCIYAGLATDTGSFRWASVRG--YRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVGGRGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKE-VEPHRWSVSMRA--KTVNLAAVASGFGGGGHRLAAGYTTTGSIDDAVASLRAALG |
3W5W Chain:A ((21-334)) | --------------------------------ADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNV--IVPNAFPDFLKWMPGSKDILLYDRYQEFADKLIMEADVICCLDFNALKRIDEMSDIVAASPGRKIM-IDHHLYPEDFCRITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGIDKDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDY--NSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE--MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYGTMEEAVKVFEQAL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198680 for 2460 contacts (-80.8/contact) +
2D Compatibility (PS) -31316 + (NN) -9816 + (LL) 2340
1D Compatibility (HY) -20000 + (ID) 4000
Total energy: -261472.0 ( -106.29 by residue)
QMean score : 0.397
|
|
|