Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDLSQRLAGRVAVITGGGSGIGLAAGRRMRAEGATIVVGDVD---VEAGGAAADELSG----LFVPTDVCDEDAVNGLFDGAAETYGRIDIAFNNAGISPPEDNLIENTELAAWQRVQDVNLKSVYLCCRAALRHMVLAGKGSIVNTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL----LQELFAKNPERAARRMVHV-PLGRFAEPDEIAAAVAFLASDDASFITASTFLVDGGISSAYVTPL |
| 1IY8 Chain:A ((10-267)) | ------RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG-NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAAY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142340 for 2129 contacts (-66.9/contact) +
2D Compatibility (PS) -26810 + (NN) -9840 + (LL) 864
1D Compatibility (HY) -14800 + (ID) 5300
Total energy: -198226.0 ( -93.11 by residue)
QMean score : 0.527
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