Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPRRPH
3CTO Chain:A ((6-68))
------SEARQRLFPLIEQVNTDHQPVRITSR-AGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVAR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3CTO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19366 for 310 contacts (-62.5/contact) +
2D Compatibility (PS) -6826 + (NN) -1478 + (LL) 1600
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -32670.0 ( -105.39 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3CTO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CTO-query.scw
PDB file :
Tito_Scwrl_3CTO.pdb
: