Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
| 3MIV Chain:A ((29-85)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKIFSGDVVDAVDVTFTYYGKTETRHFGGSGGTPHEIVLQEGEYLVGMKGEFGNYHG-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21573 for 258 contacts (-83.6/contact) +
2D Compatibility (PS) -5706 + (NN) 2629 + (LL) 18632
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -8518.0 ( -33.02 by residue)
QMean score : -0.175
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