Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
4WPL Chain:A ((12-238))
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
General information:
TITO was launched using:
RESULT:
Template:
4WPL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161761 for 1901 contacts (-85.1/contact) +
2D Compatibility (PS) -24815 + (NN) -19804 + (LL) 0
1D Compatibility (HY) -29600 + (ID) 11350
Total energy: -247330.0 ( -130.11 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4WPL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WPL-query.scw
PDB file :
Tito_Scwrl_4WPL.pdb
: