Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRS--------DPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWKPRTLPAP
3Q3W Chain:A ((2-178))
-QKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFHDLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHRICLLEGLDNI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53497 for 1327 contacts (-40.3/contact) +
2D Compatibility (PS) -18048 + (NN) -8334 + (LL) 2692
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -82437.0 ( -62.12 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_3Q3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q3W-query.scw
PDB file :
Tito_Scwrl_3Q3W.pdb
: