Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYLDHAATTPMHPAAIEAM-AAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSACTAGVAQPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAAAGASR |
4R5F Chain:A ((2-374)) | -AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIG--YAMRNAR-KGKHILVSAVEHMSVINPAKFL-QKQGFEVEYIPVGKYGEVDVSFIDQKLR--DDTILVSVQHANNEIGTIQPVEEISEV-LAGKAALHIDATASVGQIEVDVEKIGADMLTISSNKIYGPKGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVL-KIEESYLNGHPEK-RLPNNVNVRFSYIEGESIVLSLDMAGIQASTG--------QPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207368 for 3348 contacts (-61.9/contact) +
2D Compatibility (PS) -40539 + (NN) -22635 + (LL) 2640
1D Compatibility (HY) -28800 + (ID) 7350
Total energy: -304052.0 ( -90.82 by residue)
QMean score : 0.510
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