Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVMALGYLQAPVVVAGNDHWSGFRPDRIKALAGAALTA
4FIW Chain:A ((2-76))
-AITVYTKPACVQCNATKKALDRAGLEYDLVDISLDEEAREYVLALGYLQAPVVVADGSHWSGFRPERIREMATAA---
General information:
TITO was launched using:
RESULT:
Template:
4FIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40090 for 520 contacts (-77.1/contact) +
2D Compatibility (PS) -8211 + (NN) -1161 + (LL) 580
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -61582.0 ( -118.43 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_4FIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FIW-query.scw
PDB file :
Tito_Scwrl_4FIW.pdb
: