Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANTDRPALPHKRAVPPSRADSGPRRRRTKLLDAVAGFGVTLGSMFKKTVTEEYPERPGPVAARYHGRHQLNRYPDGLEKCIGCELCAWACPADAIYVEGADNTE----EERFSPGERYGRVY-------QINYLRCIGCGLCIEACP--TRALTMTYDYELADDNRADLIYEKDRLLAPLLPEMAAPPHPRTPGATDKDYYLGNVTAEGLRGVRESQTTGDSR |
2C3M Chain:A ((686-763)) | ------------------------------------------------------------------------------ENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVM-------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -38541 for 329 contacts (-117.1/contact) +
2D Compatibility (PS) -6441 + (NN) -309 + (LL) 6164
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -45377.0 ( -137.92 by residue)
QMean score : 0.285
|
|
|