Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGHVAEVNGGVAAMALWFLNFSTWDGVAGIYVEDLFVWPRFRRRGLARGLLSTLARECVDNRYTRLAWSVLNWNSDAIALYDRIGG---QPQHEWTIYRLSGPRLAALAAPR
3BJ7 Chain:A ((70-169))
----------SIVGFAMYYFTYDPWIGKL-LYLEDFFVMSDYRGFGIGSEILKNLSQVAMKCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMAA--
General information:
TITO was launched using:
RESULT:
Template:
3BJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53065 for 508 contacts (-104.5/contact) +
2D Compatibility (PS) -10656 + (NN) -4499 + (LL) 348
1D Compatibility (HY) -12400 + (ID) 1200
Total energy: -81472.0 ( -160.38 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3BJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BJ7-query.scw
PDB file :
Tito_Scwrl_3BJ7.pdb
: