Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTCPCESSERNEPVSRVSGTNEVSDGNETNNPAEVSDGNETNNPAEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVSRVSGTNEVSD---GNETNNPAPVTEKPLHPHEPHIEILRGQPTDQELAALIAVLGSISGSTPPAQPEPTRWGLPVDQLRYPVFSWQRITLQEMTHMRR |
4R1N Chain:A ((60-204)) | --------ADKEEILSRISGTTDMKLAADCDLVVEAAIENMKIKKEIFAELDGICKPETI-LASNTSSLS----------ITEVASATKRADKVIGMHFFNPAPVMK--------LVEVIRGAATSQETFDAVKEMSESIGKTPVEVAEAP--GFVVNRILIPMINEATFILQE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 55515 for 914 contacts (60.7/contact) +
2D Compatibility (PS) -15126 + (NN) -7082 + (LL) 620
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: 26527.0 ( 29.02 by residue)
QMean score : 0.051
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