Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPI--VAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP |
2MII Chain:A ((10-44)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAPVEEVKPAPEQPAEPQQPVPTVPSVPT---IPQQPG------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1698 for 74 contacts (22.9/contact) +
2D Compatibility (PS) -3927 + (NN) -11687 + (LL) 10392
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -5974.0 ( -80.73 by residue)
QMean score : 0.630
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