Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGG
2BM7 Chain:A ((3-181))
--QWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLA--
General information:
TITO was launched using:
RESULT:
Template:
2BM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184927 for 1692 contacts (-109.3/contact) +
2D Compatibility (PS) -18558 + (NN) 316 + (LL) -16
1D Compatibility (HY) -24400 + (ID) 8950
Total energy: -236535.0 ( -139.80 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_2BM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BM7-query.scw
PDB file :
Tito_Scwrl_2BM7.pdb
: