Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIDPNSIGAVTEPMLFEWTDRDTLLYAIGVGAGTGDLAFTTENSHGIDQQVLPTYAVICCPAFGAAAKV---------------GTFNPAALLHGSQGIRLHAPL-PAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCDPESGSLVAETLTTLVLRGQGGFGGARGERPAAPEFPDRHPDARIDMPTREDQALIYRLSGDRNPLHSDPWFATQLAGFPKPILHGLCTYGVAGRALVAELGGGVAANITSIAARFTKPVFPGETLSTVIWRTEPGRAVFRTEVAGSDGAEARVVLDDGAVEYVAG
3KH8 Chain:A ((20-290))------------------YNQRDLLMYAVGIGES--DLQFTYEFDEKFS--AFPLYPV-CLPFKGQSQDVVPFPPETISAAPDGMPSFNPAMILHGEQSVEILRPLDPSGGTLTGKTKVISFYDKGKG----TLMETQTQFEDGNGPVAKLISGSFIRGLTGYEGKGRKLPARVQIPKRQPDFNDEFKTSPHQAQVYRLSGDYNSLHIDPEIAKSV-GFKQPILHGLCSMGVASRALFKQFCGGDVARFKSIRVRFSSPCFPGETIQTRMWQEGSGKVLFQA-VVKERGA---VIVDGGEFVY---


General information:
TITO was launched using:
RESULT:

Template: 3KH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113215 for 2030 contacts (-55.8/contact) +
2D Compatibility (PS) -27145 + (NN) -13825 + (LL) 2652
1D Compatibility (HY) -20800 + (ID) 5200
Total energy: -177533.0 ( -87.45 by residue)
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_3KH8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KH8-query.scw
PDB file : Tito_Scwrl_3KH8.pdb: