Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFES--RTD----------VALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKK-TLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA |
| 4GP1 Chain:A ((45-335)) | -----------------------------------------------------------------------GKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFA--KEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYG-------EIGKDIKEHKRGNAVVAVALSHLGEGERRR---LLEILAREVVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAK--IPNN--GTLKELLDFIVARE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115375 for 2294 contacts (-50.3/contact) +
2D Compatibility (PS) -29991 + (NN) -21291 + (LL) 4200
1D Compatibility (HY) -14800 + (ID) 4700
Total energy: -181957.0 ( -79.32 by residue)
QMean score : 0.388
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