Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
1WNR Chain:A ((2-94))
-----IKPLGDRVVVKRI-------------------PQKGKVIAVGTGRVLENGQ-RVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ-
General information:
TITO was launched using:
RESULT:
Template:
1WNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28361 for 492 contacts (-57.6/contact) +
2D Compatibility (PS) -7987 + (NN) -1948 + (LL) 1892
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -49004.0 ( -99.60 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_1WNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNR-query.scw
PDB file :
Tito_Scwrl_1WNR.pdb
: