Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALL-AGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG |
1AJZ Chain:A ((16-280)) | ------HVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIR-SLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAP-KYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGP-------SERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133546 for 2155 contacts (-62.0/contact) +
2D Compatibility (PS) -29671 + (NN) -24741 + (LL) 172
1D Compatibility (HY) -20000 + (ID) 5600
Total energy: -213386.0 ( -99.02 by residue)
QMean score : 0.555
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